The sequence ontology
WebJan 1, 2006 · The Sequence Ontology (SO) provides terms and relationships for describing the features and attributes of biological sequences, e.g. DNA, RNA and proteins. Its purpose is to promote the standardization of sequence annotation among different organisms ( 34 ). The ontology currently contains 963 terms and 16 relationship types. WebThe Sequence Ontology (SO) is an ontology suitable for describing biological sequences. It is designed to make the naming of DNA sequence features and variants consistent and …
The sequence ontology
Did you know?
WebMar 1, 2010 · PDF The Sequence Ontology is an established ontology, with a large user community, for the purpose of genomic annotation. We are reforming the... Find, read … WebThe Sequence Ontology - Docs - FT_SO Mapping of the feature table terms and qualifiers to SO Index: Description of file Features and definitions Description of file This file lists each of the Feature Table terms and the equivalent Sequence Ontology term. The definitions of the term are given as listed in each vocabulary.
http://www.sequenceontology.org/resources/posters/ComputationalGenomics2003Poster.html WebThe Synthetic Biology Open Language (SBOL) is a community-developed data standard that allows knowledge about biological designs to be captured using a machine-tractable, ontology-backed representation that is built using Semantic Web technologies.
WebJan 1, 2004 · The Gene Ontology (GO) project is a collaborative effort to address two aspects of information integration: providing consistent descriptors for gene products, in … WebNov 4, 2007 · The GO ontologies provide a systematic language, or ontology ( 1–4 ), for the consistent description of attributes of genes and gene products, in three key biological domains that are shared by all organisms: molecular function, biological process and cellular component ( 5–11 ).
http://www.sequenceontology.org/resources/style.html
WebThe Sequence Ontology (SO) is a structured controlled vocabulary for the parts of a genomic annotation. SO provides a common set of terms and definitions that will … dutch colonial homes in pennsylvaniaWebThe Sequence Ontology - Resources - Index Home> Resources> Index Help Frequently Asked Questions Mailing Lists Tutorials Data Sources Download Ontology Releases … dutch colonial interior characteristicsWebJul 31, 2015 · The Sequence Ontology (SO) [ 1] provides terminology to define sequence features. These features are the building blocks of sequence annotation, and allow biologically meaningful regions to be assigned between coordinates of sequences such as genome assemblies and transcripts. cryptoquote answer 3/30/2022WebIt is preferred to use Sequence Ontology (SO) terms, but 'custom' (user defined) are allowed. ANN=A stop_gained HIGH transcript ... Tissue specific features may include cell type / tissue information separated by semicolon e.g.: ANN=A histone_binding_site LOW H3K4me3:HeLa-S3 cryptoquote answer 10/30/21WebThe first part of the book defines ontology and bio-ontologies. It also explains the importance of mathematical logic for understanding concepts of ... Chemical Entities of Biological Interest, Sequence Ontology, Mammalian Phenotype Ontology, and Human Phenotype Ontology. The third part of the text introduces the major graph-based … cryptoquizzes free worksheetshttp://www.sequenceontology.org/browser/obob.cgi dutch colonial light fixturesWebSep 2, 2024 · The Sequence Ontology. Welcome to the Sequence Ontology (SO). SO is a collaborative ontology project for the definition of sequence features used in biological … dutch colonial revival homes